| abortPipeline() | TOPPASBase | slot |
| activeWindow_() const | TOPPASBase | protected |
| addTOPPASFile(const String &file_name, bool in_new_window=true) | TOPPASBase | slot |
| blocks_list_ | TOPPASBase | protected |
| check_defaults_ | DefaultParamHandler | protected |
| clipboard_scene_ | TOPPASBase | protected |
| closeByTab(int id) | TOPPASBase | protectedslot |
| closeEvent(QCloseEvent *event) | TOPPASBase | protected |
| closeFile() | TOPPASBase | slot |
| createTOPPToolsTreeWidget(QWidget *parent_widget=0) | TOPPASBase | static |
| current_path_ | TOPPASBase | protected |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | protected |
| defaultsToParam_() | DefaultParamHandler | protected |
| desc_ | TOPPASBase | protected |
| descriptionUpdated_() | TOPPASBase | protectedslot |
| downloadTOPPASfromHomepage_(const QUrl &url) | TOPPASBase | protectedslot |
| error_name_ | DefaultParamHandler | protected |
| exportAsImage() | TOPPASBase | slot |
| focusByTab(int id) | TOPPASBase | protectedslot |
| getDefaults() const | DefaultParamHandler | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getSubsections() const | DefaultParamHandler | |
| IDINITIALUNTITLED | TOPPASBase | static |
| includePipeline() | TOPPASBase | slot |
| insertNewVertex_(double x, double y, QTreeWidgetItem *item=0) | TOPPASBase | protectedslot |
| insertNewVertexInCenter_(QTreeWidgetItem *item) | TOPPASBase | protectedslot |
| keyPressEvent(QKeyEvent *e) | TOPPASBase | protected |
| loadFiles(const StringList &list, QSplashScreen *splash_screen) | TOPPASBase | |
| loadPipelineResourceFile() | TOPPASBase | slot |
| loadPipelineResourceFile(TOPPASWidget *w, QString current_path) | TOPPASBase | static |
| loadPreferences(String filename="") | TOPPASBase | |
| log_ | TOPPASBase | protected |
| LogState enum name | TOPPASBase | protected |
| LS_ERROR enum value | TOPPASBase | protected |
| LS_NOTICE enum value | TOPPASBase | protected |
| LS_WARNING enum value | TOPPASBase | protected |
| message_label_ | TOPPASBase | protected |
| network_manager_ | TOPPASBase | protected |
| newPipeline(const int id=-1) | TOPPASBase | slot |
| node_offset_ | TOPPASBase | protectedstatic |
| openExampleDialog() | TOPPASBase | slot |
| openFileDialog() | TOPPASBase | slot |
| openFilesInTOPPView(QStringList all_files) | TOPPASBase | slot |
| openOnlinePipelineRepository() | TOPPASBase | slot |
| openToppasFile(QString filename) | TOPPASBase | slot |
| operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
| outputVertexFinished(const String &file) | TOPPASBase | slot |
| param_ | DefaultParamHandler | protected |
| preferencesDialog() | TOPPASBase | slot |
| refreshParameters() | TOPPASBase | slot |
| refreshPipelineParameters(TOPPASWidget *tw, QString current_path) | TOPPASBase | static |
| runPipeline() | TOPPASBase | slot |
| saveCurrentPipelineAs() | TOPPASBase | slot |
| savePipeline() | TOPPASBase | slot |
| savePipelineAs(TOPPASWidget *w, QString current_path) | TOPPASBase | static |
| savePipelineResourceFile() | TOPPASBase | slot |
| savePipelineResourceFile(TOPPASWidget *w, QString current_path) | TOPPASBase | static |
| savePreferences() | TOPPASBase | |
| saveToClipboard(TOPPASScene *scene) | TOPPASBase | slot |
| sendClipboardContent() | TOPPASBase | slot |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| showAboutDialog() | TOPPASBase | slot |
| showAsWindow_(TOPPASWidget *sw, const String &caption, const int special_id=-1) | TOPPASBase | protectedslot |
| showCursorStatus(double x, double y) | TOPPASBase | slot |
| showLogMessage_(LogState state, const String &heading, const String &body) | TOPPASBase | protected |
| showPipelineFinishedLogMessage() | TOPPASBase | slot |
| showStatusMessage(std::string msg, OpenMS::UInt time) | TOPPASBase | slot |
| showURL() | TOPPASBase | slot |
| subsections_ | DefaultParamHandler | protected |
| tab_bar_ | TOPPASBase | protected |
| tmp_path_ | TOPPASBase | protected |
| tool_bar_ | TOPPASBase | protected |
| toolCrashed() | TOPPASBase | slot |
| toolFailed() | TOPPASBase | slot |
| toolFinished() | TOPPASBase | slot |
| tools_tree_view_ | TOPPASBase | protected |
| toolStarted() | TOPPASBase | slot |
| TOPPASBase(QWidget *parent=0) | TOPPASBase | |
| toppasFileDownloaded_(QNetworkReply *r) | TOPPASBase | protectedslot |
| updateCurrentPath() | TOPPASBase | slot |
| updateMembers_() | DefaultParamHandler | protectedvirtual |
| updateMenu() | TOPPASBase | protectedslot |
| updateTabBar(QWidget *w) | TOPPASBase | slot |
| updateToolBar() | TOPPASBase | slot |
| updateTOPPOutputLog(const QString &out) | TOPPASBase | slot |
| warn_empty_defaults_ | DefaultParamHandler | protected |
| webview_ | TOPPASBase | protected |
| window_(int id) const | TOPPASBase | protected |
| ws_ | TOPPASBase | protected |
| z_value_ | TOPPASBase | protectedstatic |
| ~DefaultParamHandler() | DefaultParamHandler | virtual |
| ~TOPPASBase() | TOPPASBase | virtual |